Hi Kiran, It looks like the configuration for your dataset has a reference to a filter in another dataset. The error may be caused by the referenced dataset not being available in your registry.
David. On 29/04/2010 12:02, Kiran Mukhyala wrote: > Hello, > > I am trying to use taverna 2.1.2 with a local biomart installation which > is similar to the Ensembl mart in configuration. I am able to import the > biomart service. > But when I try to 'configure biomart query' I get the error below. > I do see my dataset when I click on 'Dataset' but when clicking on > 'Filters' or 'Attributes' I just see 'Fetching filter configuration' but > nothing happens... > > Please help, > > -Kiran > > ERROR 2010-04-29 11:47:45,898 > (org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory:1509) > - Error while generating the Query Editor > java.lang.NullPointerException > at > org.biomart.martservice.MartService.getDatasetConfig(MartService.java:307) > at > org.biomart.martservice.config.QueryConfigUtils.getReferencedFilterDescription(QueryConfigUtils.java:362) > at > org.biomart.martservice.config.QueryConfigUtils.getReferencedFilterDescription(QueryConfigUtils.java:309) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterDescriptionUI(MartServiceQueryConfigUIFactory.java:1348) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterDescriptionsUI(MartServiceQueryConfigUIFactory.java:1285) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterCollectionUI(MartServiceQueryConfigUIFactory.java:1262) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterCollectionsUI(MartServiceQueryConfigUIFactory.java:1192) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterGroupUI(MartServiceQueryConfigUIFactory.java:1173) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterGroupsUI(MartServiceQueryConfigUIFactory.java:1148) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterPageUI(MartServiceQueryConfigUIFactory.java:1131) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterPagesUI(MartServiceQueryConfigUIFactory.java:1109) > at > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory > $11.run(MartServiceQueryConfigUIFactory.java:1485) > -- David Withers School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK. +44 (0)161 275 0683 ------------------------------------------------------------------------------ _______________________________________________ taverna-users mailing list [email protected] [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/about/contact-us/
