Hi David, That was it! I removed some filters referring to missing datasets and that fixed it. Thanks a lot for the clue.
Regards, -Kiran On Thu, 2010-04-29 at 12:41 -0700, David Withers wrote: > Hi Kiran, > > It looks like the configuration for your dataset has a reference to a > filter in another dataset. The error may be caused by the referenced > dataset not being available in your registry. > > David. > > On 29/04/2010 12:02, Kiran Mukhyala wrote: > > Hello, > > > > I am trying to use taverna 2.1.2 with a local biomart installation which > > is similar to the Ensembl mart in configuration. I am able to import the > > biomart service. > > But when I try to 'configure biomart query' I get the error below. > > I do see my dataset when I click on 'Dataset' but when clicking on > > 'Filters' or 'Attributes' I just see 'Fetching filter configuration' but > > nothing happens... > > > > Please help, > > > > -Kiran > > > > ERROR 2010-04-29 11:47:45,898 > > (org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory:1509) > > - Error while generating the Query Editor > > java.lang.NullPointerException > > at > > org.biomart.martservice.MartService.getDatasetConfig(MartService.java:307) > > at > > org.biomart.martservice.config.QueryConfigUtils.getReferencedFilterDescription(QueryConfigUtils.java:362) > > at > > org.biomart.martservice.config.QueryConfigUtils.getReferencedFilterDescription(QueryConfigUtils.java:309) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterDescriptionUI(MartServiceQueryConfigUIFactory.java:1348) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterDescriptionsUI(MartServiceQueryConfigUIFactory.java:1285) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterCollectionUI(MartServiceQueryConfigUIFactory.java:1262) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterCollectionsUI(MartServiceQueryConfigUIFactory.java:1192) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterGroupUI(MartServiceQueryConfigUIFactory.java:1173) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterGroupsUI(MartServiceQueryConfigUIFactory.java:1148) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterPageUI(MartServiceQueryConfigUIFactory.java:1131) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory.getFilterPagesUI(MartServiceQueryConfigUIFactory.java:1109) > > at > > org.biomart.martservice.config.ui.MartServiceQueryConfigUIFactory > > $11.run(MartServiceQueryConfigUIFactory.java:1485) > > > > ------------------------------------------------------------------------------ _______________________________________________ taverna-users mailing list [email protected] [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/about/contact-us/
