I'll try to be clear: I've got a threaded application.  It
works fine with eCos.  I want to run the same code on Linux
without adding a lot of latency.
That supposedly is not possible. I suppose, eCos is a RealTime OS, Linux is not. That is why Linux offers a lot "standard" features, while eCos offers low latency. Offering both is not possible. If you really want both, an FPGA does offer the possibility to implement two CPUs and use both OSes side by side. If you don't like neither this idea, nor a redesign of the code for eCos, I don't think you'll get much further.

-Michael
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