It finally times out with these exceptions
ed Sep 06 21:38:07 UTC 2017,
RpcRetryingCaller{globalStartTime=1504731276347, pause=100, retries=35},
java.io.IOException: Call to ip-10-123-0-60.ec2.internal/10.123.0.60:16020
failed on local exception:
org.apache.hadoop.hbase.ipc.CallTimeoutException: Call id=77,
waitTime=60001, operationTimeout=60000 expired.
at
org.apache.hadoop.hbase.client.RpcRetryingCaller.callWithRetries(RpcRetryingCaller.java:159)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.tryAtomicRegionLoad(LoadIncrementalHFiles.java:956)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles$2.call(LoadIncrementalHFiles.java:594)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles$2.call(LoadIncrementalHFiles.java:590)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.IOException: Call to ip-10-123-0-60.ec2.internal/
10.123.0.60:16020 failed on local exception:
org.apache.hadoop.hbase.ipc.CallTimeoutException: Call id=77,
waitTime=60001, operationTimeout=60000 expired.
at
org.apache.hadoop.hbase.ipc.AbstractRpcClient.wrapException(AbstractRpcClient.java:292)
at org.apache.hadoop.hbase.ipc.RpcClientImpl.call(RpcClientImpl.java:1274)
at
org.apache.hadoop.hbase.ipc.AbstractRpcClient.callBlockingMethod(AbstractRpcClient.java:227)
at
org.apache.hadoop.hbase.ipc.AbstractRpcClient$BlockingRpcChannelImplementation.callBlockingMethod(AbstractRpcClient.java:336)
at
org.apache.hadoop.hbase.protobuf.generated.ClientProtos$ClientService$BlockingStub.bulkLoadHFile(ClientProtos.java:35408)
at
org.apache.hadoop.hbase.protobuf.ProtobufUtil.bulkLoadHFile(ProtobufUtil.java:1676)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles$3.call(LoadIncrementalHFiles.java:656)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles$3.call(LoadIncrementalHFiles.java:645)
at
org.apache.hadoop.hbase.client.RpcRetryingCaller.callWithRetries(RpcRetryingCaller.java:137)
... 7 more
Caused by: org.apache.hadoop.hbase.ipc.CallTimeoutException: Call id=77,
waitTime=60001, operationTimeout=60000 expired.
at org.apache.hadoop.hbase.ipc.Call.checkAndSetTimeout(Call.java:73)
at org.apache.hadoop.hbase.ipc.RpcClientImpl.call(RpcClientImpl.java:1248)
... 14 more
17/09/06 21:38:07 ERROR mapreduce.LoadIncrementalHFiles:
hbase.bulkload.retries.retryOnIOException is disabled. Unable to recover
17/09/06 21:38:07 INFO zookeeper.ZooKeeper: Session: 0x15e58ca21fc004c
closed
17/09/06 21:38:07 INFO zookeeper.ClientCnxn: EventThread shut down
Exception in thread "main" java.io.IOException: BulkLoad encountered an
unrecoverable problem
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.bulkLoadPhase(LoadIncrementalHFiles.java:614)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.doBulkLoad(LoadIncrementalHFiles.java:463)
at
org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.doBulkLoad(LoadIncrementalHFiles.java:373)
at
org.apache.phoenix.mapreduce.AbstractBulkLoadTool.completebulkload(AbstractBulkLoadTool.java:355)
at
org.apache.phoenix.mapreduce.AbstractBulkLoadTool.submitJob(AbstractBulkLoadTool.java:332)
at
org.apache.phoenix.mapreduce.AbstractBulkLoadTool.loadData(AbstractBulkLoadTool.java:270)
at
org.apache.phoenix.mapreduce.AbstractBulkLoadTool.run(AbstractBulkLoadTool.java:183)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
at
org.apache.phoenix.mapreduce.CsvBulkLoadTool.main(CsvBulkLoadTool.java:101)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
Caused by: org.apache.hadoop.hbase.client.RetriesExhaustedException: Failed
after attempts=35, exceptions:
Wed Sep 06 20:55:36 UTC 2017,
RpcRetryingCaller{globalStartTime=1504731276347, pause=100, retries=35},
java.io.IOException: Call to ip-10-123-0-60.ec2.internal/10.123.0.60:16020
failed on local exception:
org.apache.hadoop.hbase.ipc.CallTimeoutException: Call id=9,
waitTime=60002, operationTimeout=60000 expired.
On Wed, Sep 6, 2017 at 5:01 PM, Sriram Nookala <[email protected]> wrote:
> Phoenix 4.11.0, HBase 1.3.1
>
> This is what I get from jstack
>
> "main" #1 prio=5 os_prio=0 tid=0x00007fb3d0017000 nid=0x5de7 waiting on
> condition [0x00007fb3d75f7000]
>
> java.lang.Thread.State: WAITING (parking)
>
> at sun.misc.Unsafe.park(Native Method)
>
> - parking to wait for <0x00000000f2222588> (a java.util.concurrent.
> FutureTask)
>
> at java.util.concurrent.locks.LockSupport.park(LockSupport.java:175)
>
> at java.util.concurrent.FutureTask.awaitDone(FutureTask.java:429)
>
> at java.util.concurrent.FutureTask.get(FutureTask.java:191)
>
> at org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.bulkLoadPhase(
> LoadIncrementalHFiles.java:604)
>
> at org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.doBulkLoad(
> LoadIncrementalHFiles.java:463)
>
> at org.apache.hadoop.hbase.mapreduce.LoadIncrementalHFiles.doBulkLoad(
> LoadIncrementalHFiles.java:373)
>
> at org.apache.phoenix.mapreduce.AbstractBulkLoadTool.completebulkload(
> AbstractBulkLoadTool.java:355)
>
> at org.apache.phoenix.mapreduce.AbstractBulkLoadTool.submitJob(
> AbstractBulkLoadTool.java:332)
>
> at org.apache.phoenix.mapreduce.AbstractBulkLoadTool.loadData(
> AbstractBulkLoadTool.java:270)
>
> at org.apache.phoenix.mapreduce.AbstractBulkLoadTool.run(
> AbstractBulkLoadTool.java:183)
>
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
>
> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
>
> at org.apache.phoenix.mapreduce.CsvBulkLoadTool.main(
> CsvBulkLoadTool.java:101)
>
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>
> at sun.reflect.NativeMethodAccessorImpl.invoke(
> NativeMethodAccessorImpl.java:62)
>
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(
> DelegatingMethodAccessorImpl.java:43)
>
> at java.lang.reflect.Method.invoke(Method.java:498)
>
> at org.apache.hadoop.util.RunJar.run(RunJar.java:221)
>
> at org.apache.hadoop.util.RunJar.main(RunJar.java:136)
>
>
>
>
> On Wed, Sep 6, 2017 at 4:16 PM, Sergey Soldatov <[email protected]>
> wrote:
>
>> Do you have more details on the version of Phoenix/HBase you are using as
>> well as how it hangs (Exceptions/messages that may help to understand the
>> problem)?
>>
>> Thanks,
>> Sergey
>>
>> On Wed, Sep 6, 2017 at 1:13 PM, Sriram Nookala <[email protected]>
>> wrote:
>>
>>> I'm trying to load a 3.5G file with 60 million rows using
>>> CsvBulkLoadTool. It hangs while loading HFiles. This runs successfully if I
>>> split this into 2 files, but I'd like to avoid doing that. This is on
>>> Amazon EMR, is this an issue due to disk space or memory. I have a single
>>> master and 2 region server configuration with 16 GB memory on each node.
>>>
>>
>>
>
