Another possibility is to deploy a snapshot in a public maven repo. Hopefully you can get the binary tarball onto your machines somehow. I will to do that know and let you know where to get this.
-jerry On Thu, Sep 22, 2016 at 3:01 PM, David Fox <david....@humedica.com> wrote: > Building from svn on our linux machines is a bit tricky, because they are > cut off from the internet by a firewall, and maven install wants internet > access to download dependencies. It looks like there are workarounds for > that > (http://stackoverflow.com/questions/7233328/how-do-i- > configure-maven-for-of > fline-development suggests Artifactory), but it may take a day or two > before I can get everything set up. > > I could build it on my dev machine (OS X), but with the binary install, I > wasn’t able to get the sample UIMA C++ code to build on Mac OS X. (My > eventual plan is to get linux on my dev machine via virtual box, but that > means more software to install…) > > So anyway, I’ll try to get this working so I can build from svn before the > fix, reproduce the problem, and then update and verify the fix. > > Thanks, > David > > On 9/22/16, 1:23 PM, "Jaroslaw Cwiklik" <uim...@gmail.com> wrote: > > >I think I see the bug. Do you know how to build uima-as from svn? > > > >https://urldefense.proofpoint.com/v2/url?u=https- > 3A__uima.apache.org_build > >ing-2Duima.html&d=DQIFaQ&c=3XrKki35ZWuh8X2qbeRISQ&r= > BYS7q6K6Famz8NiMJzvOgY > >A-WQSvBt9z6TEbaT3nnNM&m=9Hf7csP-1jIlxx_vgB3QA47yh0w3i1-XbVER8KQmhT8& > s=Gin5 > >am-lATmbl6WQFmZrKwjxKa3tiL1qz1ykFh0cdWI&e= > > > >I will fix this shortly in the svn trunk. The next release of uima-as > >(2.9.0) is in the > >works. I will get a release candidate out hopefully next week. > > > >-jerry > > > >On Thu, Sep 22, 2016 at 12:08 PM, David Fox <david....@humedica.com> > >wrote: > > > >> Thanks for the quick response > >> > >> Yes, it occurs every time, at the same line in RunRemoteAsyncAE and > >> org.apache.uima.adapter.jms.client.BaseUIMAAsynchronousEngine_ > >> impl.undeploy(BaseUIMAAsynchronousEngine_impl.java:964) > >> > >> > >> > >> > >> > >> On 9/22/16, 11:15 AM, "Jaroslaw Cwiklik" <uim...@gmail.com> wrote: > >> > >> >This warning > >> > > >> >WARN Transport - Transport Connection to: tcp:// > >> >127.0.0.1:56261 failed: java.io.EOFException > >> > > >> >is from brokers log or console I suspect. It just means that the broker > >> >lost a connection to a client. Looks like the client > >> >went away without closing a connection. This is probably a side-effect > >>of > >> >NPE. > >> > > >> >Is the NPE repeatable? Does it happen each time you run this test? > >>Looking > >> >for a hint if there is a race > >> >condition in the UIMA-AS code. > >> > > >> > > >> > > >> >On Thu, Sep 22, 2016 at 10:54 AM, David Fox <david....@humedica.com> > >> >wrote: > >> > > >> >> I¹m using the UIMA C++ framework 2.4.0 (32-bit) on linux (CentOS > >>6.5), > >> >>and > >> >> following the instructions > >> >>https://urldefense.proofpoint.com/v2/url?u=https- > >> 3A__uima.apache.org_d_&d > >> >>=DQIFaQ&c=3XrKki35ZWuh8X2qbeRISQ&r=BYS7q6K6Famz8NiMJzvOgYA- > >> WQSvBt9z6TEbaT > >> >>3nnNM&m=dFZSJENJkyCDLeCQuBn89fBrTrsdKh4RIWwwPV7r0o8&s=CaIoLZ_7Je- > >> TYsr0ZIP > >> >>xs98mHRestzC4RtgVSp7kJaY&e= > >> >> uimacpp-2.4.0/docs/overview_and_setup.html. I¹ve successfully built > >> >> DaveDetector and run it with the standalone C++ pipeline (runAECpp) > >>and > >> >> within a Java pipeline via JNI. I¹ve now installed UIMA AS 2.8.1 so > >>I > >> >>can > >> >> follow the instructions under 2.3 Testing Interoperability with UIMA > >>AS > >> >> > >> >> > >> >> cd $UIMACPP_HOME/examples/tutorial > >> >> runRemoteAsyncAE.sh tcp://localhost:61616 MeetingAnnotator \ > >> >> -d descriptors/Deploy_MeetingAnnotator.xml > >> >> > >> >> > >> >> I get a NullPointerException and a transport warning about a > >> >> java.io.EOFException > >> >> > >> >> > >> >> runRemoteAsyncAE.sh tcp://localhost:61616 MeetingAnnotator -d > >> >> descriptors/Deploy_MeetingAnnotator.xml -o `pwd`/out > >> >> > >> >> Attempting to deploy descriptors/Deploy_MeetingAnnotator.xml ... > >> >> > >> >> Waiting for Uima C++ service to connect... > >> >> > >> >> Waiting for Uima C++ service to connect... > >> >> > >> >> Waiting for Uima C++ service to report init status... > >> >> > >> >> deployCppService.cpp91 Start receiving messages > >> >> > >> >> > >> >> Startinging GetMetaData instance > >> >> > >> >> > >> >> Starting Annotator instance 0 > >> >> > >> >> > >> >> deployCppService.cpp UIMA C++ Service MeetingAnnotator at > >> >> tcp://localhost:61616 Ready to process... > >> >> > >> >> > >> >> Uima C++ service at MeetingAnnotator Ready to process... > >> >> > >> >> UIMA AS Service Initialization Complete > >> >> > >> >> .Completed 1 documents > >> >> > >> >> Time Elapsed : 2184 ms > >> >> > >> >> java.lang.NullPointerException > >> >> > >> >> at > >> >>org.apache.uima.adapter.jms.client.BaseUIMAAsynchronousEngine_ > >> >> impl.undeploy(BaseUIMAAsynchronousEngine_impl.java:964) > >> >> > >> >> at > >> >>org.apache.uima.adapter.jms.client.BaseUIMAAsynchronousEngine_ > >> >> impl.undeploy(BaseUIMAAsynchronousEngine_impl.java:906) > >> >> > >> >> at org.apache.uima.examples.as.RunRemoteAsyncAE.run( > >> >> RunRemoteAsyncAE.java:260) > >> >> > >> >> at org.apache.uima.examples.as.RunRemoteAsyncAE.main( > >> >> RunRemoteAsyncAE.java:314) > >> >> > >> >> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native > >>Method) > >> >> > >> >> at sun.reflect.NativeMethodAccessorImpl.invoke( > >> >> NativeMethodAccessorImpl.java:62) > >> >> > >> >> at sun.reflect.DelegatingMethodAccessorImpl.invoke( > >> >> DelegatingMethodAccessorImpl.java:43) > >> >> > >> >> at java.lang.reflect.Method.invoke(Method.java:497) > >> >> > >> >> at org.apache.uima.bootstrap.UimaBootstrap.main( > >> >> UimaBootstrap.java:87) > >> >> > >> >> WARN Transport - Transport Connection to: > >>tcp:// > >> >> 127.0.0.1:56221 failed: java.io.EOFException > >> >> > >> >> I'm > >> >> I can also run with a collection reader: > >> >> > >> >> > >> >> runRemoteAsyncAE.sh tcp://localhost:61616 MeetingAnnotator -d > >> >> descriptors/Deploy_MeetingAnnotator.xml -o `pwd`/out -c > >> >> /misc/NLP/dfox/scratch/uima/apache-uima-as-2.8.1/examples/ > >> >> descriptors/collection_reader/FileSystemCollectionReader.mine.xml > >> >> > >> >> (where the modified collection reader points to > >> >>$UIMA_HOME/examples/data) > >> >> in which case I get ³Completed 8 documents², and xmi output for each > >>in > >> >>the > >> >> out/ directory, but still get the same exception and warning. Based > >>on > >> >> that (plus looking at the RunRemoteAsyncAE java source), it looks > >>like > >> >>my > >> >> analysis engine is running fine, but then hitting some problem when > >> >> RunRemoteAsyncAE tries to undeploy the C++ annotator. > >> >> > >> >> I¹m trying to figure out if this is something I should worry about > >> >> (especially if it reflects a problem with running UIMA C++ 2.4 and > >>UIMA > >> >>AS > >> >> 2.8.1), or if it is normal or harmless. > >> >> > >> >> When I run the similar test with one of the Java-only UIMA AS > >>samples: > >> >> > >> >> > >> >> runRemoteAsyncAE.sh tcp://localhost:61616 MeetingDetectorTaeQueue -d > >> >> deploy/as/Deploy_MeetingDetectorTAE.xml -c > >> >>descriptors/collection_reader/ > >> >> FileSystemCollectionReader.mine.xml > >> >> > >> >> I still get the transport warning > >> >> > >> >> > >> >> WARN Transport - Transport Connection to: > >>tcp:// > >> >> 127.0.0.1:56261 failed: java.io.EOFException > >> >> > >> >> but not the NullPointerException > >> >> > >> >> Thanks, > >> >> David > >> >> > >> >> > >> >> > >> >> > >> >> > >> >> > >> > >> > >
