Sounds good Rayson. You've got at least one user anxious to use your
work. :)
Thanks,
--
Brian McNally
On 05/18/2012 12:10 PM, Rayson Ho wrote:
If you are looking for the tight SSH integration created by Ron& I
back in 2005, you may want to wait for the announcement next week for
the new features of GE 2011.11 update 1 - we have a much better
solution for this on Linux.
We are going to release update 1 (minor release with features) in June.
Rayson
On Fri, May 18, 2012 at 3:03 PM, Brian McNally<bmcna...@uw.edu> wrote:
Thanks all, I've made a lot more progress on building OGS thanks to some of
the tips here. I'm trying to build OGS with tight SSH integration and am
getting this error:
$ ./aimk -parallel 2 -spool-berkeleydb -no-dump -only-depend -tight-ssh
Warning:
Setting $JAVA_HOME to "/usr" causes problems on some systems,
because the associated include path will be "/usr/include",
which is a reserved system include path.
Building in directory: /tmp/GE2011.11/source
making in LINUXX64/ for LINUXX64 at host buildhost.local
_________S_G_E__D_E_P_E_N_D_______________
make: Nothing to be done for `all'.
_________3_r_d_p_a_r_t_y__SSH_____________
/tmp/GE2011.11/source/3rdparty/openssh: No such file or directory.
It looks like that directory doesn't exist. Is the -tight-ssh option broken?
--
Brian McNally
On 05/11/2012 05:32 PM, Chi Chan wrote:
I compiled GE 2011.11 on RHEL 5.8, and I installed a number of
dependencies:
$ yum install pam-devel ncurses ncurses-devel openssl-devel
And if you need the qmon UI, you will need to yum install a few more X
libraries like OpenMOTIF, libXpm.
--Chi
On Fri, May 11, 2012 at 8:14 PM, Brian McNally<bmcna...@uw.edu> wrote:
Running RHEL 6.2 and following the instructions for no dependencies here:
http://gridscheduler.sourceforge.net/CompileGridEngineSource.html
My build fails on:
gcc -DSGE_ARCH_STRING=\"linux-x64\" -O3 -Wall -Wstrict-prototypes
-DUSE_POLL
-DLINUX -DLINUXX64 -DLINUXX64 -D_GNU_SOURCE -DGETHOSTBYNAME_R6
-DGETHOSTBYADDR_R8 -DHAS_VSNPRINTF -I/build/berkeleydb/include/
-DTARGET_64BIT -DSPOOLING_classic -Wno-strict-aliasing -DNO_JNI
-DCOMPILE_DC -D__SGE_COMPILE_WITH_GETTEXT__ -D__SGE_NO_USERMAPPING__
-DTHREADBINDING -DHWLOC -I../common -I../libs -I../libs/uti
-I../libs/juti
-I../libs/gdi -I../libs/japi -I../libs/sgeobj -I../libs/cull
-I../libs/rmon
-I../libs/comm -I../libs/comm/lists -I../libs/sched -I../libs/evc
-I../libs/evm -I../libs/mir -I../libs/lck -I../daemons/common
-I../daemons/qmaster -I../daemons/execd -I../daemons/schedd
-I../clients/common -I.
-I/net/gs/vol2/home/bmcnally/build/GE2011.11/source/3rdparty/hwloc/hwloc-1.2.2/include/
-I/home/user/build/GE2011.11/source/3rdparty/hwloc/hwloc-1.2.2/LINUXX64/include
-c ../utilbin/authuser.c -o authuser.o
../utilbin/authuser.c:72:31: error: security/pam_appl.h: No such file or
directory
../utilbin/authuser.c:402: warning: ‘struct pam_response’ declared inside
parameter list
../utilbin/authuser.c:402: warning: its scope is only this definition or
declaration, which is probably not what you want
../utilbin/authuser.c:402: warning: ‘struct pam_message’ declared inside
parameter list
../utilbin/authuser.c: In function ‘do_pam_authenticate’:
../utilbin/authuser.c:418: error: ‘pam_handle_t’ undeclared (first use in
this function)
../utilbin/authuser.c:418: error: (Each undeclared identifier is reported
only once
../utilbin/authuser.c:418: error: for each function it appears in.)
../utilbin/authuser.c:418: error: ‘pamh’ undeclared (first use in this
function)
../utilbin/authuser.c:419: error: storage size of ‘pamconv’ isn’t known
../utilbin/authuser.c:434: warning: implicit declaration of function
‘pam_start’
../utilbin/authuser.c:435: error: ‘PAM_SUCCESS’ undeclared (first use in
this function)
../utilbin/authuser.c:439: warning: implicit declaration of function
‘pam_authenticate’
../utilbin/authuser.c:439: error: ‘PAM_SILENT’ undeclared (first use in
this
function)
../utilbin/authuser.c:446: warning: implicit declaration of function
‘pam_acct_mgmt’
../utilbin/authuser.c:455: warning: implicit declaration of function
‘pam_strerror’
../utilbin/authuser.c:461: warning: implicit declaration of function
‘pam_end’
../utilbin/authuser.c:461: error: ‘PAM_ABORT’ undeclared (first use in
this
function)
../utilbin/authuser.c:419: warning: unused variable ‘pamconv’
../utilbin/authuser.c: At top level:
../utilbin/authuser.c:478: warning: ‘struct pam_response’ declared inside
parameter list
../utilbin/authuser.c:478: warning: ‘struct pam_message’ declared inside
parameter list
../utilbin/authuser.c:477: error: conflicting types for ‘login_conv’
../utilbin/authuser.c:401: note: previous declaration of ‘login_conv’ was
here
../utilbin/authuser.c: In function ‘login_conv’:
../utilbin/authuser.c:489: error: ‘PAM_CONV_ERR’ undeclared (first use in
this function)
../utilbin/authuser.c:493: error: invalid application of ‘sizeof’ to
incomplete type ‘struct pam_response’
../utilbin/authuser.c:498: error: ‘PAM_BUF_ERR’ undeclared (first use in
this function)
../utilbin/authuser.c:511: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:512: error: ‘PAM_PROMPT_ECHO_OFF’ undeclared (first
use in this function)
../utilbin/authuser.c:514: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:514: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:516: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:516: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:528: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:528: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:529: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:529: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:548: error: ‘PAM_PROMPT_ECHO_ON’ undeclared (first
use
in this function)
../utilbin/authuser.c:560: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:560: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:561: error: invalid use of undefined type ‘struct
pam_response’
../utilbin/authuser.c:561: error: dereferencing pointer to incomplete
type
../utilbin/authuser.c:572: error: ‘PAM_ERROR_MSG’ undeclared (first use
in
this function)
../utilbin/authuser.c:573: error: ‘PAM_TEXT_INFO’ undeclared (first use
in
this function)
../utilbin/authuser.c:591: error: ‘PAM_SUCCESS’ undeclared (first use in
this function)
Any ideas? I'm currently evaluating alternatives to SGE moving forward. I
think OGS would be a good option if I can get it to build.
Thanks
--
Brian McNally
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