Hi, Am 19.03.2014 um 11:45 schrieb Abhinav Mittal:
> I am trying to run a software called > "Segway"(http://noble.gs.washington.edu/proj/segway/doc/1.1.0/segway.html) Before looking into any application specific problems: is a simple script echo'ing "Hello World" working? Can you submit a binary with `qsub -b y hostname` too? -- Reuti > and getting an error "your job is not allowed to run in any que". > submit host : localhost , abhnav > hostname : abhnav > Still I am getting this error > Please help. > > ----------------------------------------------------------------------------------------------------------------- > > abhinav@abhnav:~$ segway --num-labels=4 train test.genomedata traindir > traindir/observations/chr21.0000.float32 (9411193, 9595548) > ____ PROGRAM ENDED SUCCESSFULLY WITH STATUS 0 AT Wednesday March 19 > 2014, 16:06:01 IST ____ > Traceback (most recent call last): > File "/home/abhinav/arch/Linux-x86_64/bin/segway", line 9, in <module> > load_entry_point('segway==1.1.0', 'console_scripts', 'segway')() > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 3592, in main > return runner() > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 3429, in __call__ > self.run(*args, **kwargs) > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 3407, in run > self.run_train() > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 3038, in run_train > instance_params = run_train_func(num_segs_range) > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 3056, in run_train_singlethread > res = [self.run_train_instance()] > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 2937, in run_train_instance > self.run_train_round(instance_index, round_index, **kwargs) > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 2899, in run_train_round > round_index, **kwargs) > File "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/run.py", > line 2770, in queue_train_parallel > res.queue(restartable_job) > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/cluster/__init__.py", > line 174, in queue > self._queue_unconditional(restartable_job) > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/cluster/__init__.py", > line 164, in _queue_unconditional > jobid = restartable_job.run() > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/segway/cluster/__init__.py", > line 116, in run > res = self.session.runJob(job_template) > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/drmaa-0.7.6-py2.7.egg/drmaa/session.py", > line 314, in runJob > c(drmaa_run_job, jid, sizeof(jid), jobTemplate) > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/drmaa-0.7.6-py2.7.egg/drmaa/helpers.py", > line 299, in c > return f(*(args + (error_buffer, sizeof(error_buffer)))) > File > "/home/abhinav/arch/Linux-x86_64/lib/python2.7/drmaa-0.7.6-py2.7.egg/drmaa/errors.py", > line 151, in error_check > raise _ERRORS[code - 1](error_string) > drmaa.errors.DeniedByDrmException: code 17: warning: abhinav your job > is not allowed to run in any queue > Your job 15 ("emt0.0.0.traindir.43308e4eaf5211e3a4741803736f5e43") has > been submitted > abhinav@abhnav:~$ hostname > abhnav > abhinav@abhnav:~$ qconf -ss > abhnav > localhost > _______________________________________________ > users mailing list > [email protected] > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
