Hi, > Am 10.08.2015 um 12:45 schrieb Yuri Burmachenko <[email protected]>: > > Hello Reuti, > > We've checked with DA/end-customers redirecting the output and/or using > '-noshell' option is not applicable due to the following reasons: > > 1. User environment must be loaded.
Ok. > 2. It is important that the output will be displayed due to other third-party > tools doing live analysis on the returned output. Is it not displayed without a shell? One could pipe the output to a created FIFO device. Or start `qrsh` with process substitution, i.e: $ my_analyzer < <(qrsh ...) Maybe one of these helps. > Do you know if the problem is in qrsh (similar issue documented here - > https://arc.liv.ac.uk/trac/SGE/ticket/747 ) and if yes when its planned to be > resolved? I don't know whether there was anything done after this. -- Reuti > > Thank You! > > -----Original Message----- > From: Reuti [mailto:[email protected]] > Sent: Monday, August 10, 2015 12:10 PM > To: Yuri Burmachenko > Cc: [email protected]; EdaIt; Leior Varon > Subject: Re: [gridengine users] Using Qrsh - error: commlib error: got read > error (closing "host1/shepherd_ijs/1") > > Hi, > >> Am 10.08.2015 um 08:21 schrieb Yuri Burmachenko <[email protected]>: >> >> Hello Reuti, >> >> We use SoGE 8.1.8 (previously used SGE 6.1u6) at the moment. >> Not sure if SGE_NO_EXIT_MAIL=TRUE is effective with the version we use - do >> you recommend removing this variable? > > It's just the case, that I never heard of it and can't find it documented. As > said: if the intent is to disable any emails which are send by other default > settings in your environment, "-m n" can be used. > > -- Reuti > > >> >> Also I've noticed there was a ticket which marked as fixed with the same >> symptom here - https://arc.liv.ac.uk/trac/SGE/ticket/747 . >> >> We'll try the suggested for now. >> Thank You! >> >> -----Original Message----- >> From: Reuti [mailto:[email protected]] >> Sent: Sunday, August 09, 2015 6:53 PM >> To: Yuri Burmachenko >> Cc: [email protected]; EdaIt; Leior Varon >> Subject: Re: [gridengine users] Using Qrsh - error: commlib error: got >> read error (closing "host1/shepherd_ijs/1") >> >> Hi, >> >> Am 09.08.2015 um 15:02 schrieb Yuri Burmachenko: >> >>> Hallo to distinguished forum members, >>> >>> We are trying to run some job with a lot of output via qrsh and we get the >>> following error: >>> * error: commlib error: got read error (closing >>> "host1/shepherd_ijs/1") >>> >>> Calling command: >>> * /opt/sge/bin/lx24-amd64/qrsh -b y -q all.q -now no -l mem_free=1G >>> -v DISPLAY=vnchost:10 -V -w w -cwd -N some_job -v SGE_NO_EXIT_MAIL=TRUE >>> job_with_a_lot_of_output >> >> Just for curiosity: is SGE_NO_EXIT_MAIL new in Univa's GE and does the same >> as "-m n"? >> >> The lot of output is send to the terminal? Did you also try to redirect it >> to a file? >> >> You can also try to use "-noshell", as you start a binary. >> >> -- Reuti >> >> >>> >>> Do you familiar with this error, how can it be avoided? >>> >>> Any tips will be greatly appreciated. >>> Thank You. >>> >>> >>> >>> Yuri Burmachenko | Sr. Engineer | IT | Mellanox Technologies Ltd. >>> Work: +972 74 7236386 | Cell +972 54 7542188 |Fax: +972 4 959 3245 >>> Follow us on Twitter and Facebook >>> >>> _______________________________________________ >>> users mailing list >>> [email protected] >>> https://gridengine.org/mailman/listinfo/users >> >> > > _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
