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Dear Wenhe,

clustalx exports to PostScript with colour coding according to
conservation. seaview is another tool for that purpose.

Tim

On 02/03/2012 06:32 AM, WENHE ZHONG wrote:
> Dear members,
> 
> Apologize for this off-topic question. I am looking for a protein sequence
> alignment tool which is capable to generate a particular output file
> similar to the attached format (please see the attached picture). I have
> been looking at some popular programs but none of them can show the
> conserved amino acids by colored blocks as shown in the attached file.
> 
> Maybe some of you have seen some programs can do this? Thank you.
> 
> King regards,
> Wenhe
> 

- -- 
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen

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