On 08/08/12 14:31, Katherine Sippel wrote: > The 3tvn coordinates/SF were released today. I'm not sure what the lag > time is between the PDB and EDS but you'd probably need to download the > structure factors and generate the map yourself.
A very good point. I saw the deposition date of 2011 but didn't read down to the release date. The EDS does not get an advanced look at entries in the PDB. The data has to be released to the public before it can begin the calculations. This can take a couple weeks. In addition, the server, itself, appears to be down at the moment. I don't think you could download the map even if it existed. Dale Tronrud > > If you're not in a super rush I know the person who refined that > specific PDB and I may be able to get you a copy of her final maps to > send you off-board once she gets back from vacation. > > Cheers, > Katherine > > > On Wed, Aug 8, 2012 at 3:39 PM, Shya Biswas <shyabis...@gmail.com > <mailto:shyabis...@gmail.com>> wrote: > > Hi all, > > I was trying to get maps using the *fetch PDB and Map using EDS > option* in coot, however the map would not open I am using coot > version 0.6.2 was wondering if anybody else had similar problems and > how to fix this, the following is the error message I get. It used > to work fine with a previous version of coot. > > > > CCP4MTZfile: open_read - File missing or corrupted: > coot-download/3tvn_sigmaa.mtz > INFO:: not an mtz file: coot-download/3tvn_sigmaa.mtz > ERROR: no f_cols! > ERROR: no phi_cols! > valid_labels(coot-download/3tvn_sigmaa.mtz,FOFCWT,PHFOFCWT,,0) returns 0 > >>>>>> CCP4 library signal library_file:End of File (Error) > raised in ccp4_file_raw_read <<<<<< > >>>>>> System signal 0:Success (Error) > raised in ccp4_file_rarch <<<<<< > >>>>>> CCP4 library signal library_file:End of File (Error) > raised in ccp4_file_raw_read <<<<<< > >>>>>> System signal 0:Success (Error) > raised in ccp4_file_readchar <<<<<< > >>>>>> CCP4 library signal mtz:Read failed (Error) > raised in MtzGet <<<<<< > CCP4MTZfile: open_read - File missing or corrupted: > coot-download/3tvn_sigmaa.mtz > INFO:: not an mtz file: coot-download/3tvn_sigmaa.mtz > ERROR: no f_cols! > ERROR: no phi_cols! > WARNING:: label(s) not found in mtz file > coot-download/3tvn_sigmaa.mtz FOFCWT PHFOFCWT > WARNING:: -1 is not a valid molecule in set_scrollable_map > > thanks, > Shya > >
