On 2/28/13 9:23 AM, Valentina Erastova wrote: > Thank you! > > I have managed to install gromacs and gromacs-mpi with fink on the other > machine without problems.
Provided that the machine where you had success is running an older or the same operating system version as the one where you are having problems, you can copy the archive files: /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-dev_4.6-2_darwin-x86_64.deb /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi_4.6-1_darwin-x86_64.deb /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-shlibs_4.6-2_darwin-x86_64.deb /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs_4.6-2_darwin-x86_64.deb (change the paths as appropriate) to the machine where you are having the problem, and then use dpkg -i <filenames> replacing <filenames> with e.g. gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb gromacs-shlibs_4.6-2_darwin-x86_64.deb to install them. > > I am a little confused with fink now, as when I install gromacs it wipes > away libraries for gromacs-mpi and vice-versa > > oparin02:~ d47fvj$ which mdrun > /sw/bin/mdrun > oparin02:~ d47fvj$ which mdrun_mpi > oparin02:~ d47fvj$ fink install gromacs-mpi > Information about 7002 packages read in 1 seconds. > The following package will be installed or updated: > gromacs-mpi > Reading buildlock packages... > /sw/bin/dpkg-lockwait -i > /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/gromacs-mpi_4.6-2_darwin-x86_64.deb > Selecting previously deselected package gromacs-mpi. > dpkg: considering removing gromacs in favour of gromacs-mpi ... > dpkg: yes, will remove gromacs in favour of gromacs-mpi. > (Reading database ... 37676 files and directories currently installed.) > Unpacking gromacs-mpi (from .../gromacs-mpi_4.6-2_darwin-x86_64.deb) ... > Setting up gromacs-mpi (4.6-2) ... > > I must be doing something wrong:/ > How do I make sure I get both gromacs and gromacs-mpi at the same time? I am > not sure where fink is storing files. > > Thank you very much! > > > You can't have them both at the same time in the same Fink tree, by design. You can use "dpkg -L <packagename>" to see what is installed where in a package. -- Alexander Hansen, Ph.D. Fink User Liaison My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ Fink-users mailing list [email protected] List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
