On 3/1/13 9:44 AM, Valentina Erastova wrote: > > On 28 Feb 2013, at 17:16, Alexander Hansen <[email protected]> > wrote: > >> On 2/28/13 9:23 AM, Valentina Erastova wrote: >>> Thank you! >>> >>> I have managed to install gromacs and gromacs-mpi with fink on the other >>> machine without problems. >> >> Provided that the machine where you had success is running an older or >> the same operating system version as the one where you are having >> problems, you can copy the archive files: >> >> /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-dev_4.6-2_darwin-x86_64.deb >> /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb >> /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi_4.6-1_darwin-x86_64.deb >> /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-shlibs_4.6-2_darwin-x86_64.deb >> /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs_4.6-2_darwin-x86_64.deb >> >> (change the paths as appropriate) to the machine where you are having >> the problem, and then use >> >> dpkg -i <filenames> >> >> replacing <filenames> with e.g. >> gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb >> gromacs-shlibs_4.6-2_darwin-x86_64.deb to install them. >> >>> >>> I am a little confused with fink now, as when I install gromacs it wipes >>> away libraries for gromacs-mpi and vice-versa >>> >>> oparin02:~ d47fvj$ which mdrun >>> /sw/bin/mdrun >>> oparin02:~ d47fvj$ which mdrun_mpi >>> oparin02:~ d47fvj$ fink install gromacs-mpi >>> Information about 7002 packages read in 1 seconds. >>> The following package will be installed or updated: >>> gromacs-mpi >>> Reading buildlock packages... >>> /sw/bin/dpkg-lockwait -i >>> /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/gromacs-mpi_4.6-2_darwin-x86_64.deb >>> Selecting previously deselected package gromacs-mpi. >>> dpkg: considering removing gromacs in favour of gromacs-mpi ... >>> dpkg: yes, will remove gromacs in favour of gromacs-mpi. >>> (Reading database ... 37676 files and directories currently installed.) >>> Unpacking gromacs-mpi (from .../gromacs-mpi_4.6-2_darwin-x86_64.deb) ... >>> Setting up gromacs-mpi (4.6-2) ... >>> >>> I must be doing something wrong:/ >>> How do I make sure I get both gromacs and gromacs-mpi at the same time? I >>> am not sure where fink is storing files. >>> >>> Thank you very much! >>> >>> >>> >> >> You can't have them both at the same time in the same Fink tree, by >> design. You can use "dpkg -L <packagename>" to see what is installed >> where in a package. > > can I somehow move them to /usr/local/src (i normally have everything there) > Sorry very confused here. > >
No. Fink isn't set up to allow you to move stuff around. -- Alexander Hansen, Ph.D. Fink User Liaison My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ Fink-users mailing list [email protected] List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
