Did you have more than 1 run? Try using the rawavg.mgz instead of the
001.mgz if you did.
Bruce
On Fri, 1 Sep 2006, Frederick Klauschen wrote:
Hi Bruce,
(aim: transform fs format back to original file
format)
when I run the commands you suggested:
mri_convert -rl orig/001.mgz brainmask.mgz
brainmask_transformed.mgz
the backtransformed image is in the original
coordinate boundaries, but it is not a the same
position as the original data (see attached example).
Frederick
--- Bruce Fischl <[EMAIL PROTECTED]> wrote:
if your orig volume is in orig/001.mgz, then you can
do:
mri_convert -rl orig/001.mgz brainmask.mgz
brainmask_transformed.mgz
cheers,
Bruce
On Thu, 31 Aug
2006, tulu wrote:
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