Hi I have a dataset originally processed with the Autumn 2005 FS version (2.2?). I know need wm segs, and in order to get this, I've tried to run
-cortribbon -cortparc -cortparc2 -aparc2aseg -wmparc But the cc doesn't get labeled in the cortparc, and consequently (?) not in the wmparc either. I've also tried to rerun all of -autorecon3, but w/o difference. When rerunning recon-all -all, it gets fixed, but I would like to keep as much as possible as is, since I did lots of edits due to a temporal bias field problem. I've edited the asegs in some instances, and that is not kept by default. Grateful for tips on how far down in the processing stream I need to go to get correct wmparcs w/cc. Thanks, Kristine _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
