Hi LJ, yes, the volume of the amygdala is in the stats/aseg.stats file for each subject. There should also be an estimated intracranial volume and brain size that you can use to account for either one (which represent somewhat different hypotheses). In general I think the consensus is that volumes should be corrected, but not thickness.
cheers Bruce On Sat, 23 Jan 2010, liyari5018 wrote: > Hi all, > When I completed the recommended recon-all step, I want to get the volume(or > size) of amygdala for ecah individual subject and to do correlation > analysis with psychological scale, how can I do this ??? For a group level > analysis , should i do some head size correction befor ??? > > Thanks for your reply!!! > L J _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
