Hi Ed, that subject is out-of-synch (maybe it got aborted). You'll need to re-run some portion of recon-all depending upon where in the stream it aborted.
doug Ed Gronenschild wrote: > Hi, > > A serious error was encountered in running recon-all with option > -qcache. > The error occurred during execution of mri_surf2surf and the > message was: > > number of vertices in ....../subjectID/surf/lh.thickness does not match > surface (141969,131763). > > It means the number of vertices in lh.sphere.reg does not > match the number in lh.thickness. > > I traced the course of this error and that is causing me serious > troubles. What happened? I edited the wm voxels and then > invoked another call to recon-all by issueing the command > recon-all -autorecon2-wm. > Looking at the dates of the files in the surf directory I noticed > that the file lh.sphere.reg was not updated, so it was still the > same file as before editing the wm voxels. The lh.thickness > was correctly updated as expected. > > What can I do to use the -qcache option? > > Ed > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
