Hi Martin: I processed a patient (with two MRIs in different dates) using the instructions in the web page that you told me, but I didn't understand very well the results that I got...
Which values I got in aseg.stats with: i) recon-all -base <templateid> -tp <tp1id> -tp <tp2id> -all ii) recon-all -long <tp1id> <templateid> -all iii) recon-all -long <tp2id> <templateid> -all Sincerely, Gonzalo Rojas Costa El 03-03-2011 13:03, Martin Reuter escribió: > Hi Gonzalo, > > you should run your data with the longitudinal stream (if you use fs 5.0 > update mri_robust_template and recon-all first), see infos on : > http://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalProcessing > > After processing, you can compare the volume measures in > the /stats/aseg.stats files from the longitudinal directories. > You can also map both the asegs from the long dirs to base and compute > dice coefficients on specific labels, or you can compare surface > measures etc. > For all this you should be familiar with the cross sectional stream in > freesurfer. > > Best, Martin _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
