I don't understand why I would all of a sudden be getting permission denied errors, when I ran a complete study prior to this with absolutely no problems at all.
From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Rouhollah Abdollahi Sent: 15 August 2011 18:15 To: Ahmed, F, Me Cc: freesurfer@nmr.mgh.harvard.edu; Louis Nicholas Vinke Subject: Re: [Freesurfer] recon-all error with nu_correct check this!!! /bin/mv: cannot move `./tmp.mri_nu_correct.mni.26621/1/nu2_residue.mnc' to `./ tmp.mri_nu_correct.mni.26621/1/nu2_est.mnc': Permission denied On Mon, Aug 15, 2011 at 6:03 PM, Ahmed, F, Me <fah...@sun.ac.za<mailto:fah...@sun.ac.za>> <fah...@sun.ac.za<mailto:fah...@sun.ac.za>> wrote: Hi Louis, The command line I am using at the beginning was the following: recon-all-i NN_117_10/NN117_10.MR.RESEARCH_STELLENBOSCH.2.1.2010.02.09.13.10.21.390625.46080549.IMA -s NN_117_10 -force -autorecon-all -----Original Message----- From: freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu> [mailto:freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] On Behalf Of Louis Nicholas Vinke Sent: 15 August 2011 17:59 To: Ahmed, F, Me <fah...@sun.ac.za<mailto:fah...@sun.ac.za>> Cc: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] recon-all error with nu_correct Hi Fatima, What is the recon-all command line you are using to start the recon? -Louis On Mon, 15 Aug 2011, Ahmed, F, Me <fah...@sun.ac.za<mailto:fah...@sun.ac.za>> wrote: > Hello Freesurfer experts, > > I am having great difficulty in trying to run the recon-all process on some > scans of mine. I have tried running it a number of times, to no avail and the > error I have gotten most recently is the nu_correct error. I have attached > the log for this recon-all and hope someone may be able to help. > > Also, I was told that there is a way one can upload a particular scan via > FTP, is this correct and if so, how does one go about doing this? > > Thank you! > Fatima > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- With Best Regards Rouhollah Abdollahi
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
