does that file exist? LAOUCHEDI MAKHLOUF wrote: > hi doug > i am using the v5.0.0 version, the massage i have when > running "mri_aparc2aseg --s ctr12 --a2009s" is : > ( SUBJECTS_DIR makh_free > subject ctr12 > outvol makh_free/ctr12/mri/aparc.a2009s+aseg.mgz > useribbon 0 > baseoffset 10100 > RipUnknown 0 > > Reading lh white surface > makh_free/ctr12/surf/lh.white > > Reading lh pial surface > makh_free/ctr12/surf/lh.pial > > Loading lh annotations from makh_free/ctr12/label/lh.aparc.a2009s.annot > could not read annot file makh_free/ctr12/label/lh.aparc.a2009s.annot > No such file or directory > ERROR: MRISreadAnnotation() failed > makh_free/ctr12/label/lh.aparc.a2009s.annot) > > same thing when using : --annot aparc.a2009s > > thanks for your help > > > --- En date de : *Lun 21.11.11, Douglas N Greve > /<gr...@nmr.mgh.harvard.edu>/* a écrit : > > > De: Douglas N Greve <gr...@nmr.mgh.harvard.edu> > Objet: Re: [Freesurfer] use of --a2009s flag > À: "LAOUCHEDI MAKHLOUF" <laouma...@yahoo.fr> > Cc: Freesurfer@nmr.mgh.harvard.edu > Date: Lundi 21 novembre 2011, 18h18 > > What version are you using? You can accomplish the same thing with > --annot aparc.a2009s > doug > > LAOUCHEDI MAKHLOUF wrote: > > hi everyone > > > > i am trying to use the mri_aparc2aseg command with > the > > --a2009s flag to have the aparc.a2009s labels and i have the > following > > message " Option --a2009s unknown" > > > > thanks > > > > > ------------------------------------------------------------------------ > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > </mc/compose?to=Freesurfer@nmr.mgh.harvard.edu> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu </mc/compose?to=gr...@nmr.mgh.harvard.edu> > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > </mc/compose?to=Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to > whom it is > addressed. If you believe this e-mail was sent to you in error and > the e-mail > contains patient information, please contact the Partners > Compliance HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to > you in error > but does not contain patient information, please contact the > sender and properly > dispose of the e-mail. >
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
