Hi Knut does it segfault on other systems? Can you email me the 001.mgz and I'll see if it works here?
thanks Bruce On Tue, 29 Jan 2013, Knut J Bjuland wrote: > When I run recon-all using freesurfer 5.2 latest beta it will segment crash. > > Linux mypc 3.7.4-204.fc18.x86_64 #1 SMP Wed Jan 23 16:44:29 UTC 2013 x86_64 > x86_64 x86_64 GNU/Linux > /home/knutjbj/freesurfer/ernie > > mri_convert /usr/local/freesurfer/subjects/sample-001.mgz > /home/knutjbj/freesurfer/ernie/mri/orig/001.mgz > > mri_convert /usr/local/freesurfer/subjects/sample-001.mgz > /home/knutjbj/freesurfer/ernie/mri/orig/001.mgz > Segmentation fault > Linux super-knut 3.7.4-204.fc18.x86_64 #1 SMP Wed Jan 23 16:44:29 UTC 2013 > x86_64 x86_64 x86_64 GNU/Linux > > recon-all -s ernie exited with ERRORS at ti. 29. jan. 19:25:15 +0100 2013 > > For more details, see the log file > /home/knutjbj/freesurfer/ernie/scripts/recon-all.log > To report a problem, see > http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > > Knut J > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
