Thanks! it is working perfectly, I created a command file to take several screenshots, for example:
[...] -cam azimuth 90 -ss imagen6.png -cam azimuth 90 -cam Elevation 90 -ss imagen7.png -slice 127 180 127 -ss imagen8.png -slice 127 80 127 -cam Elevation 180 -ss imagen9.png -quit On Fri, May 31, 2013 at 5:34 PM, Ruopeng Wang <rpw...@nmr.mgh.harvard.edu>wrote: > If you use '-ss' option, freeview will save a screenshot and close > itself. For example: > > freeview -v foo.mgz -ss foo.jpg > > > On 05/31/2013 11:13 AM, Ender Konukoglu wrote: > > Sure. > > I couldn't find that option neither. > > What I did was to semi-automatize. > I wrote a batch file to call freeview multiple times with different > parameters. > Each time freeview pops up and I save the image/video. During this time > the process in the terminal waits for me. > When I shut that window the next freeview window pops up and I do the > same. > > Ender > > > On 05/31/2013 11:05 AM, Garikoitz Lerma-Usabiaga wrote: > > Thanks! > > I can visualize the 3D renders of interest with different colors, but > from "freeview -h" I couldn't get the following: is it possible to > automatize the "File > Save movie frames" option? > > Thanks again! > Gari > > > > On Fri, May 31, 2013 at 4:59 PM, Juan Eugenio Iglesias < > igles...@nmr.mgh.harvard.edu> wrote: > >> Ender asked me to forward you this: >> >> I had to automate freeview recently. >> Freeview can be used via command line. >> For options please write >> freeview -h >> in the console / terminal. >> >> An example command that produces a surface and overlays a map on it: >> freeview -f lh.inflated:overlay=L.mgz -cam azimuth 180 >> >> Let me know if this helps. >> >> Cheers, >> >> E >> >> >> >> >> On Fri, 2013-05-31 at 08:35 -0400, Ruopeng Wang wrote: >> > There is a screenshot option -ss from the command-line. Run 'freeview >> -h' will show you all the available options. >> > >> > Ruopeng >> > >> > On May 31, 2013, at 6:16 AM, Garikoitz Lerma-Usabiaga < >> gariko...@gmail.com> wrote: >> > >> > > Hi list, >> > > is it possible to automate Freeview automation from the command line? >> > > >> > > I want to automatically render 3D images of the hippocampus (I have a >> separate volume, based on hippo-subfields) and have an image for all >> subjects for quality checking. >> > > >> > > thanks! >> > > Gari >> > > _______________________________________________ >> > > Freesurfer mailing list >> > > Freesurfer@nmr.mgh.harvard.edu >> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > >> > >> >> -- >> Juan Eugenio Iglesias, PhD >> http://www.jeiglesias.com >> igles...@nmr.mgh.harvard.edu >> Athinoula A. Martinos Center for Biomedical Imaging >> 149 Thirteenth Street, Suite 2301 >> Charlestown, Massachusetts 2129 >> U.S.A. >> >> >> >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> > > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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