Hello freesurfers,
I am currently attempting to create a normalized .mgz file from an
input brain using mri_ca_normalize. Ultimately, I will use the norm.mgz
file to create a .gca atlas for infant MRI's.
Currently, I have three of the four required arguments. I am lacking the
talairach.lta file. In order to obtain this file, I must run recon-all.
However, I do not wish to run recon-all until I have obtained the necessary
.gca atlas described above.
Is there possibly some sort of alternative iterative method to create
the talairach transform? If so, does it require a different atlas than the
MNI305 atlas?
Thanks for the help!
-Mark
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