Hi Doug & Surfers, I'm having this same issue. I'm running funcroi-table-sess on two analyses (lh and rh). There was no 'log' folder in my working directory, so I created it. Everythingran fine for the lh, but when I try to run it in the rh I get
set: Variable name must begin with a letter Here's the output of 'bugr' on my machine: --------------------------------------------------------------------- FREESURFER_HOME: /scratch/local/pkg/freesurfer/freesurfer-5.1.0 Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 RedHat release: Fedora release 17 (Beefy Miracle) Kernel info: Linux 3.6.3-1.fc17.x86_64 x86_64 --------------------------------------------------------------------- Let me know if you'd like me to send the terminal output of funcroi-table-sess -debug Thanks! Katie On 8/19/13 4:05 PM, Douglas N Greve wrote: > Is there a folder called "log" in the directly you are running it from? > If not, try creating one. If so, then > run it with -debug as the first arg and send me the terminal output. > > doug > > > On 08/19/2013 02:07 PM, Joseph Andreano wrote: >> Hi All, >> >> I'm trying to use funcroi-table-sess, but whenever I send this command: >> >> funcroi-table-sess -roi l_amyg_test -analysis habit_concat.mni305 >> -contrast neg1Vfix -sf subjects.lst -o l_amyg_neg1Vfix.dat >> >> I get this error: >> >> set: Variable name must begin with a letter >> >> So far as I can tell, all the variables in that command begin with a >> letter. Any idea what the problem might be? >> >> >> _________________________________ >> >> Joseph M. Andreano, PhD >> Postdoctoral Researcher >> Interdisciplinary Affective >> Science Laboratory >> Massachusetts General Hospital >> _________________________________ >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
