Hi Lisa

what you are seeing is probably the effects of resampling. What did the labels look like before mapping? And you need to send us your full mri_label2label command line so that we (Doug?) can help.

cheers
Bruce


On Mon, 16 Sep 2013, Lisa Prilop wrote:

Hi,
I have the following problem: I'm trying to map lesions from different
patients into talairach space. I hand-drew the lesions and saved them as
labels, then opened them on fsaverage. I didn't get an error-message, but in
the direct comparison between the native label (of the individual patient)
to the transformed label on fsaverage I could see that the lesions were
wrongly placed. I tried that with different flags on mri_label2label. Once
the place was roughly correct but then the label itself looked different (it
was a grid). What can I do to put that right? I attached a jpg-file
demonstrating what i mean.
 
Thanks for your help!
 
Lisa Prilop

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