On 06/23/2015 04:52 PM, joseph veliz wrote: > Hello, > > > We are having issues installing Freeview on Macbook pro (2015) > > 2.2 GHz, 16GB DDR3, OSX 10.9.4, Integrated 1.5 GB intel iris pro graphic > processing. > > Installing lastest Freesurfer and Freeview downloads of Darwin lion v5.3.0. > > After installing Freesurfer , license and environment setup, the only > freeview found is in the bin folder and is named freeview.bin
This doenst make sense because the OSX distribution of freesurfer does not contain a "freeview.bin" file. Only the linux distribution contains that file. Are you sure you didn't download and install the linux build on your OSX machine? -Zeke > > Commands to open freeview did not work. > > Then I placed the seperately downloaded Freeview.app in the > /application/freesurfer directory, then the command freeview responded. > > We don't know if we are putting the Freeview.app in the correct directory? > > When opening freeview; > > Volumes are loading fine, but when a Surface is loaded the program > quits, giving error message. > > I am thinking the integrated graphics could be the issue (uses computers > RAM). Reading the freesurfer Requirments wiki, > Graphics card: 3D graphics card with its own graphics memory & > accelerated OpenGL drivers. Could this be the issue even though the > macbook has 16GB DDR3 to spare? > > Also I don't think I am placing the Freeview.app in the correct directory? > > Both gui and script attempts fail loading Surfaces and return error > > 2015-06-23 12:43:29.660 Freeview[1855:303] modalSession has been exited > prematurely - check for a reentrant call to endModalSession: > dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address > Referenced from: > /Applications/freesurfer/Freeview.app/Contents/MacOS/../Frameworks/libgomp.1.dylib > Expected in: /usr/lib/libSystem.B.dylib > > dyld: Symbol not found: ___emutls_get_address > Referenced from: > /Applications/freesurfer/Freeview.app/Contents/MacOS/../Frameworks/libgomp.1.dylib > Expected in: /usr/lib/libSystem.B.dylib > > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 5 TRAP > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC > ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to > find memory corruption errors > [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, > and run > [0]PETSC ERROR: to get more information on the crash. > [0]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [0]PETSC ERROR: Signal received! > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Petsc Release Version 2.3.3, Patch 13, Thu May 15 > 17:29:26 CDT 2008 HG revision: 4466c6289a0922df26e20626fd4a0b4dd03c8124 > [0]PETSC ERROR: See docs/changes/index.html for recent updates. > [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > [0]PETSC ERROR: See docs/index.html for manual pages. > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Unknown Name on a darwin12. named > fmris-MacBook-Pro.local by Dopamine Tue Jun 23 12:40:59 2015 > [0]PETSC ERROR: Libraries linked from > /usr/pubsw/packages/petsc/2.3.3-p13-64b/src/petsc-2.3.3-p13/lib/darwin12.2.0-c-opt > [0]PETSC ERROR: Configure run at Mon Dec 17 15:29:35 2012 > [0]PETSC ERROR: Configure options --with-debugging=no --with-cc=gcc > --with-fc=0 --download-f-blas-lapack=0 --download-mpich=1 --with-mpi=1 > --with-x=0 --with-gnu-copyright-code=0 --with-shared=0 COPTFLAGS=-O3 > CXXOPTFLAGS=-O3 FOPTFLAGS=-O3 > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: User provided function() line 0 in unknown directory > unknown file > [unset]: aborting job: > application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0 > > > > Any help or comments are much appreciated > > Thank you so much, > > Jospeh Veliz > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
