Thanks! Works wonderful! Heidi On 10/21/15, 10:50 PM, "Douglas N Greve" <gr...@nmr.mgh.harvard.edu> wrote:
>If you want to remove them, you can use mri_binarize with the --replace >option, replacing them with whatever you want. > >On 10/21/2015 04:38 PM, Jacobs H (NP) wrote: >> Hi, >> >> I am trying to generate a segmentation file containing the aseg+aparc >> but replacing the hippocampus with the hippocampal subfields. >> With mergeseg I was able to merge the segmentations, but unfortunately >> parts of the ³old² hippocampus (labeled as 17 and 53) are still in >> there (as the area covered by the subfields is not 100% equal to the >> hippocampus of the aseg). >> How can I remove the remains of the old hippocampal labels? >> >> Many thanks! >> Best >> Heidi >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >-- >Douglas N. Greve, Ph.D. >MGH-NMR Center >gr...@nmr.mgh.harvard.edu >Phone Number: 617-724-2358 >Fax: 617-726-7422 > >Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >www.nmr.mgh.harvard.edu/facility/filedrop/index.html >Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > >_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >The information in this e-mail is intended only for the person to whom it >is >addressed. If you believe this e-mail was sent to you in error and the >e-mail >contains patient information, please contact the Partners Compliance >HelpLine at >http://www.partners.org/complianceline . If the e-mail was sent to you in >error >but does not contain patient information, please contact the sender and >properly >dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
