What version of FS (and mri_mcsim) are you using? Does it die if you run with just a few reps (eg, 100)?
On 08/16/2016 01:21 PM, miracle ozzoude wrote: > Hello FreeSurfer team, > While running monte carlo correction with 10000 reps (mri_mcsim) for > the whole hemisphere, I received this error at 975 reps for the left > hemisphere > > " 975 3197.9 0 mri_mcsim(25495) malloc: ***mmap(size=16777216) failed > (error code=12) > *** error: can't allocate region > *** set a breakpoint in malloc_error_break to debug > Bus error" > What does this mean and how can I resolve it? Below was my mri_mcsim > command line " mri_mcsim --o > wholebrainanalysis/average/mult-comp-cor/fsaverage/lh/cortex --base > mc-z --surface fsaverage lh --nreps 10000" > > Thank you > Paul > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
