Hello, I checked your script, I think this is to map the aparc.annot, I have already done that, what I want is to map the aseg.annot subcortical segmentation like what we can do for aparc, so do you have any idea?? Thanks in advance
________________________________ De : Hao wen Envoyé : mardi 6 décembre 2016 18:18 À : [email protected] Objet : RE: [Freesurfer] Volumetric Group Analysis: asegstats2tbale result to plot a z-score map for the segmentation Thanks very much, I will try to look at that:) Perfect FS,hahah ________________________________ De : [email protected] <[email protected]> de la part de Douglas Greve <[email protected]> Envoyé : mardi 6 décembre 2016 17:51 À : [email protected] Objet : Re: [Freesurfer] Volumetric Group Analysis: asegstats2tbale result to plot a z-score map for the segmentation This is a tricky thing to do. I've created a matlab file to help, which you can get from here: https://gate.nmr.mgh.harvard.edu/safelinks/greve/annotval2surfoverlay.m Look at the help for an example on how to use it. You will have to specify the list of ROI names and the corresponding list of values that you want each ROI to be filled with. See the example On 12/6/16 9:57 AM, Hao wen wrote: Hello, FS experts: I have a question for visualizing statistical analysis asegstats2tbale result into a map like what we have done in qdec, which uses the thickness information, so if i want to use the volume information of the different segmentation volume, and after doing z-score for two groups, how can I visualize it into a z map??? For example, for the volumetric group analysis, I compute the z-scores for the different subcortical volumes between these two group, how do i visualize the result in sphere??? Really need your help Any help will be appreciated Hao _______________________________________________ Freesurfer mailing list [email protected]<mailto:[email protected]> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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