Hi FS experts,
I want to register T1 image to its freesurfer space (i.e. wmparc.mgz) using the command
bbregister --t1 --mov T1.nii --init-fsl --reg t1.reg.dat --s subj
do I need to apply brain extraction tools before this step or bb register can accept non-brain extracted images?
Best,
John
John
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