To augment Matt's comment, the v6.0 T1-only stream is more accurate and
sensitive to than 5.3 according to our tests (both cortically and
subcortically). I think Matt has found some examples where the T1+T2
stream has some inaccurate placement. Matt, weren't you going to send me
examples?
doug
On 3/13/17 5:09 PM, Matt Glasser wrote:
Not yet. We are hoping FreeSurfer 6.1 will work nicely with the HCP
Pipelines. For now version 6.0 has some regressions as far as surface
placement goes and there are also some adaptations we need to make to
the pipelines.
Peace,
Matt.
From: <freesurfer-boun...@nmr.mgh.harvard.edu
<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of CAGNA
Bastien <bastien.ca...@univ-amu.fr <mailto:bastien.ca...@univ-amu.fr>>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu
<mailto:freesurfer@nmr.mgh.harvard.edu>>
Date: Monday, March 13, 2017 at 7:21 AM
To: "freesurfer@nmr.mgh.harvard.edu
<mailto:freesurfer@nmr.mgh.harvard.edu>"
<freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.harvard.edu>>
Subject: [Freesurfer] Can we use fressurfer 6 with the Human
connectome project's pipeline ?
Dear freesurfer experts,
I'm wondering if it's possible to run the human connetome project's
minimal processing pipeline using freesurfer 6 ?
Does it require some update of the pipeline or is there anybody that
have already enjoyed the new freesurfer version with this pipeline ?
Thank you for your attention and your help,
Bastien Cagna
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