Hi Maria
are they in register? If so you can do:
mri_convert -rl fmri_data.mgh ribbon.mgz mask.mgz
mri_mask fmri_data.mgh mask.mgz masked_fmri.mgz
cheers
Bruce
On Mon, 10 Apr 2017, Maria Hakonen
wrote:
Dear Freesurfer experts,
I have tried to mask fMRI data with grey matter mask as follows:
mri_mask fmri_data.mgh ribbon.mgz masked_fmri.mgz
However, I am getting an error " dimension mismatch between source and mask".
Could someone please let me know how to solve this problem?
Best,
Maria
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