Hi Josue
how would you define the borders of the white matter of the gyrus? I guess
you could use the wmparc stuff and just count voxels based on a distance
constraint
cheers
Bruce
On Tue, 9
May 2017, Josue Luiz Dalboni Da Rocha wrote:
Dear Freesurfer team,
I am working with calculated volumes of a gyrus (a costumized label).
I currently use mris_anatomical_stats to calculate the volumes of my gyrus
(in label format).
According to the freesurfer tutorial (as I understood), one of the stats
outputted from mris_anatomical_stats is the volume of the gray matter
surrounding the white/gray matter border (a surface) specified by the
inputted label.
We are actually interested in the white matter volume (instead of gray
matter volume) inside this ROI (a gyrus in our case) specified by the label.
I didn't find yet a command in freesurfer from where I can extract the white
matter volume of a gyrus from a costumized label.
Could someone advise me?
Best regards,
Josue
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