Thanks for the reply. freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.
I opened it with fslview and it looks like a normal 3-dimentional file. Thanks Francesca 2017-07-31 16:38 GMT+02:00 Douglas Greve <gr...@nmr.mgh.harvard.edu>: > what version of FS are you running? > > > On 7/30/17 12:37 PM, Bruce Fischl wrote: > > Hi Francesca > > > > why is the nifti 5-dimensional? The code is complaining that it doesn't > > know how to intepret the input volume > > > > cheers > > Bruce > > On Sun, 30 Jul 2017, Francesca > > Strappini wrote: > > > >> Hi, I'm trying to register to the surface a t-test map created with afni > >> (3dttest++) but I got this error message: > >> > >> mri_vol2surf --mov movierestTest.nii.gz --regheader fsaverage > --surf-fwhm 3 > >> --hemi lh --o movierestTest_lh.nii.gz > >> > >> srcvol = movierestTest.nii.gz > >> srcreg unspecified > >> srcregold = 0 > >> srcwarp unspecified > >> surf = white > >> hemi = lh > >> reshape = 0 > >> interp = nearest > >> float2int = round > >> GetProjMax = 0 > >> INFO: float2int code = 0 > >> niiRead(): 5 dimensions in/media/francesca/DATA/ > Shared/fmri-experiments/fc_categories/searchlight/tes > >> rest/movierestTest.nii.gz; unsupported > >> Invalid argument > >> ERROR: could not read movierestTest.nii.gz as type 24 > >> > >> Thanks > >> Francesca > >> > >> > >> -- > >> Francesca Strappini, Ph.D. > >> Neurobiology Department > >> Weizmann Institute of Science > >> 234 Herzl Street, Rehovot 7610001 Israel > >> Tel.: +972 58 444 2584 > >> E-mail: francesca.strapp...@weizmann.ac.il > >> > >> > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strapp...@weizmann.ac.il
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