Hi Bruce,
Here is the command that I tried and the resulting output/error message: fsuser@xubuntu-VirtualBox:~$ export TUTORIAL_DATA=C:\tutorial data fsuser@xubuntu-VirtualBox:~$ export SUBJECTS_DIR=$TUTORIAL_DATA/buckner_data/tutorial_subjs fsuser@xubuntu-VirtualBox:~$ cd $SUBJECTS_DIR bash: cd: C:tutorial/buckner_data/tutorial_subjs: No such file or directory fsuser@xubuntu-VirtualBox:~$ ^C fsuser@xubuntu-VirtualBox:~$ Sincerely, Jason Ledesma Staff Research Associate Phone: 1(424)571-7755 E-mail: jason.lede...@labiomed.org<mailto:jason.lede...@labiomed.org> ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl <fis...@nmr.mgh.harvard.edu> Sent: Wednesday, August 30, 2017 1:24:12 PM To: Freesurfer support list Subject: Re: [Freesurfer] Freesurfer Preliminary Questions Hi Jason in general it is much easier for us if you can cut and paste text into the email. Pictures are useful for showing things in the data and such cheers Bruce On Wed, 30 Aug 2017, Ledesma, Jason wrote: > > Hi Bruce, > > > Thank you for your quick response. Attached are photos in number order which > should help to explain my situation. The first three photos depict the > tutorial data as > they are downloaded into my computer. Photo 4 illustrates the version of > Freesurfer that I am using. Photos 5 and 6 express how the downloaded > tutorial data folder has > been shared to Freesurfer. Photo 7 illustrates an example of the commands I > have used. I have tried other pathways as well but am still unsure which the > proper command > should be. Unix is in fact new to me. Let me know if you require any other > details. Looking forward to hearing your thoughts. > > > Sincerely, > > Jason Ledesma > Staff Research Associate > Phone: 1(424)571-7755 > E-mail: jason.lede...@labiomed.org > > ________________________________________________________________________________________________________________________________________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Bruce Fischl > <fis...@nmr.mgh.harvard.edu> > Sent: Wednesday, August 30, 2017 12:10:24 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] Freesurfer Preliminary Questions > Hi Jason > > can you elaborate about what you mean by you "cannot interact with the > data"? > > In general, please send us the full command you ran and all its screen > output including whatever errros you encountered > > cheers > Bruce > On > Wed, 30 Aug 2017, Ledesma, Jason wrote: > > > > > To whom it may concern, > > > > > > I am to attend the upcoming Freesurfer course session in Boston, and I > > would like to ask a few preliminary questions. I am currently attempting > > to run Freesurfer 5.3 > > on a windows unit via the Oracle VM VirtualBox Manager. I have tried to > > follow the instructions of the tutorial thus far, but am having trouble > > properly downloading > the > > tutorial data into Freesurfer (the data I am attempting to acquire can be > > found at > > http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/OutputData_freeview). I > > have > > tried setting up a shared folder and placing the data in a "Machine > > Folder", but I still cannot interact with the data. Do you know why this > > may be? I see that a > > license key must first be obtained in some instances; perhaps this is the > > reason there are issues. Also, what is the best way to download the most > > recent version of > > Freesurfer on windows? Thank you. > > > > > > Sincerely, > > > > Jason Ledesma > > Staff Research Associate > > Phone: 1(424)571-7755 > > E-mail: jason.lede...@labiomed.org > > > >_______________________________________________________________________________________________________________________________________________________________________ > _ > > LA BioMed Warning: This email (and any attachments) is intended for the use > > of the person to which it is addressed. It may contain information that is > > privileged and > > confidential. As the recipient, you are obligated to maintain it in a safe, > > secure and confidential manner. Unauthorized disclosure or failure to > > maintain > > confidentiality may subject you to governmental penalties. Should you not > > be the intended recipient, please notify us by return email, and delete > > this message from > your > > computer at once. > > > >_______________________________________________________________________________________________________________________________________________________________________ > _ > > > > > >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
