That is kind of weird. It says it has found a segmentation with number 229, but
we don't have that code in our system. Can you find the 229 voxels in the
aparc+aseg.mgz?
On 10/4/2019 6:28 PM, Marina Fernández wrote:
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Dear experts,
The following error occurs with one subject when I am running gtmseg command:
Computing colortable
ERROR: cannot find match for subcortical segid 229
ERROR: mri_gtmseg -s qsm_04_year3 --usf 2 --o gtmseg.mgz --apas apas+head.mgz
--no-subseg-wm --no-keep-cc --no-keep-hypo
gtmseg existed with errors
ans=1
Do you know what happened with this subject? What can I do to solve it?
Thank you very much in advance.
Marina.
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