External Email - Use Caution Sorry for that. psf is zero. Thank you very much Douglas.
Kate On Thu, Feb 20, 2020 at 3:55 PM Douglas N. Greve <dgr...@mgh.harvard.edu> wrote: > yes, they are, thought I don't know why you include "psf6" in the output > folder. > > On 2/20/2020 3:36 PM, Kate Marvel wrote: > > External Email - Use Caution > Dear All, > > I would like to perform no partial volume correction of PET using > PETSURFER. > The steps followed in doing this is shown below: > > gtmseg --s Patient_1 > > mri_concat Patient_1_pet.nii.gz --mean --o > Patient_1_pet_tac_vol_mean.nii.gz > > mri_coreg --s Patient_1 --mov Patient_1_pet_tac_vol_mean.nii.gz --reg > Patient_1_pet_registration.lta --threads 4 > > mri_gtmpvc --i Patient_1_pet.nii.gz --reg Patient_1_pet_registration.lta > --no-tfe --psf 0 --seg gtmseg.mgz --o Patient_1_gtmpvc.output.psf6 > > I would like to know whether these steps suffices for a no partial volume > correction. > > Thanks. > -- > kate > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- kate
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
