Hi, looks like someone changed the default python to version 3, and you are still using a script written for python 2. I think Andrew updated this recently, so obtaining a newer version of the long_submit_jobs script from dev may fix this.
Best, Martin On Tue, 2020-02-11 at 18:03 +0000, Huang, Yiting wrote: > Hi there, > > I am trying to run some longitudinal data using freesurfer > long_submit_jobs command on cluster. I have double checked my > directory and files setup according to freesurfer longitudinal > preprocessing wiki: > https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Scripts. And it > seems there is no problem with my setup. > However, when I run the command it keeps sending me error as below: > > launchpad:yh917[21] long_submit_jobs --qdec long.qdec.table.dat -- > cdir $PWD/../ --cross --base --long --pause 5 --max 200 --queue > max100 > File "/usr/local/freesurfer/stable6_0_0/bin/long_submit_jobs", line > 94 > print "job submission failed, maybe unknown host "+hostname > ^ > SyntaxError: Missing parentheses in call to 'print'. Did you mean > print("job submission failed, maybe unknown host "+hostname)? > > I can't figure out the reasons. Any help please? > > Thanks, > Yiting > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
