do you mean where the cursor is? That's in hippocampus or amygdala, so
it is fine that the pial surfaces cuts through them
On 7/21/2020 1:44 PM, Angel Hammond wrote:
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Hello Freesurfer Experts,
I think I may already know the answer to this, but just wanted to
check in to be sure. I know that in general when checking the recon
for a subject for pial and wm line correctness, that subcortical
structure segmentation within those lines is not that important to
correct. I was looking at a subject that looks to be be omitting
subcortical structures from the pial line and persists for many
slices. Is this something that needs to be corrected with wm edits or
is this not to be worried about? I included some screenshots of the area.
Thanks!
*Angel Hammond*
*Research Specialist
*
Center for Healthy Minds
University of Wisconsin-Madison
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