So you want the AAL atlas on the surface? If so, then run recon-all on
the AAL anatomical T1w volume template, then use mri_vol2surf to sample
the labels on the surface, then use this surface segmentation or extract
labels (mri_cor2label with --surf option) or convert to an annotation
(mris_seg2annot)
On 11/11/2020 11:32 AM, Alberto Del Cerro Leon wrote:
External Email - Use Caution
Good afternoon, my name is Alberto del Cerro and I am a PhD student in
the cognitive and computational neuroscience laboratory (LNCyC) at the
biomedical technology center (CTB) of the Polytechnic University of
Madrid (UPM). I am currently extracting the structural data from the
T1 images of my project and I would like to extract the volume,
thickness and curvature data in the regions of interest where I
obtained results in electrophysiology (MEG). The point is that for
this data I used the AAL atlas and I would like to use these regions
to obtain structural data in FreeSurfer. Researching on the internet I
have read that this is possible with the mri_label2vol command but I
would like to know how I can proceed to obtain this data. Can you
guide me in this process?
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