External Email - Use Caution I want to obtain gray matter, withe matter volume, thickness and curvature based on AAL segmentation.
El jue., 12 nov. 2020 15:27, Douglas N. Greve <dgr...@mgh.harvard.edu> escribió: > So you want the AAL atlas on the surface? If so, then run recon-all on the > AAL anatomical T1w volume template, then use mri_vol2surf to sample the > labels on the surface, then use this surface segmentation or extract labels > (mri_cor2label with --surf option) or convert to an annotation > (mris_seg2annot) > > > On 11/11/2020 11:32 AM, Alberto Del Cerro Leon wrote: > > External Email - Use Caution > Good afternoon, my name is Alberto del Cerro and I am a PhD student in the > cognitive and computational neuroscience laboratory (LNCyC) at the > biomedical technology center (CTB) of the Polytechnic University of Madrid > (UPM). I am currently extracting the structural data from the T1 images of > my project and I would like to extract the volume, thickness and curvature > data in the regions of interest where I obtained results in > electrophysiology (MEG). The point is that for this data I used the AAL > atlas and I would like to use these regions to obtain structural data in > FreeSurfer. Researching on the internet I have read that this is possible > with the mri_label2vol command but I would like to know how I can proceed > to obtain this data. Can you guide me in this process? > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1Anx-jqyTFx_zp_nRElN9YnBQYNKuxs-SalxSsOz_ANH05UryTFARX6Jt6pBxjWvamuz7NMWZHlvZ4pxrzGVnGWkmzVYQlK0BsYZD_AyQfdqwrwohLYliOxLyTrtTSuqOM863QBKVnU4oYcMspXiVW9tgZJNlU3ndNsx-UUdG-k5QKP76Ql3MxkJFyFIUIasLjtD-J7SicWx_7SZWz_CFNvG8SbThvs5XsieCHbXOgmwSm1sL5nJIhvM9CVCqabpp6rDIqtHFsa52Yr4xdKfr4g/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
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