Right. Actually, I don't think it would apply the smoothing to the
annotation anyway
On 11/29/2021 10:43 AM, Daniel Westfall wrote:
External Email - Use Caution
Good afternoon,
It is my understanding that if I am only interested in the already
averaged region ROIs that are output in the .stats files that I should
not use a smoothing kernel as they are already averaged across all
vertices, correct?
My specific question has to do with calculating the average cortical
thickness and total surface area of the Yeo networks using this command:
mri_surf2surf \
--srcsubject fsaverage \
--trgsubject $dir \
--hemi lh \
--sval-annot
/$SUBJECTS_DIR/fsaverage/label/lh.Yeo2011_7Networks_N1000.annot
--tval /$SUBJECTS_DIR/$dir/label/lh.Yeo2011_7Networks_N1000.annot
In this case, if I want to use the output from the
lh.Yeo2011_7Networks_N1000.stats then I would NOT want to use the
--fwhm 10 flag, as they are already averaged and this could cause
bleeding between the different regions, correct?
Thank you!
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