On 11/29/2021 11:55 AM, Alexopoulos, Dimitrios wrote:
External Email - Use Caution
A quick question.
Is it feasible or even possible to edit the aseg.mgz using another
program (i.e. ITK-snap after converting to nifti), and rerunning the
pipeline using the revised aseg as input
To regenerate volumes and surfaces?
I think that should work. Edit the aseg.presuf.mgz, then run
-autorecon2-noaseg -autorecon3
Do WM edits need to need to be completed on the WM.mgz and/or using
Control Points?
I'm not sure what you mean here. WM edits can only be done on wm.mgz (or
filled.mgz for 7.2+).
Jim
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