This usually means that there is a large difference in the geometry
between time points eg, the voxel size has changed substantially. If you
want more help, make sure to include the recon-all.log file
On 6/7/2024 7:45 AM, Yasmine Salman wrote:
External Email - Use Caution
Dear FreeSurfer developers,
I am trying to run longitudinal recon-all -long command. For some
subject the recon-all -long command does not work and the error
message indicate that 'transformed geometry does not match". I checked
and the initial recon-all finished without error as well as the
recon-all -base. I also tried to re-run de base but it does not help.
Knowing that recon-all -long command worked for the majority of my
subjects, what can explain that it does not work for some of them ?
And how can we solve that problem ?
Thanks in advance for your help,
Best,
Yasmine
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