External Email - Use Caution Hi there,
I'm using this version of Freesurfer: freesurfer-linux-centos8_x86_64-7.4.1-20230613-7eb8460 I'm using mc-sess to run motion correction on some functional task and resting state data. I would like to perform censoring on high motion timepoints in order to reduce spurious correlations due to movement during connectivity analysis. My main question is: does mc-sess include censoring? If so, what are the threshold parameters? If not, are there any optional arguments to turn censoring on? If not, how do you recommend doing motion correction with censoring using Freesurfer? I know mc-sess uses AFNI's motion correction, just not sure if it utilizes censoring. Thank you, Tom
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.