rekado pushed a commit to branch master
in repository guix.
commit 75817956c165a7233cf079d341f8a67c1c8c3826
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Sat Jun 5 08:33:38 2021 +0200
gnu: r-hdf5array: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.20.0.
[arguments]: Remove.
[propagated-inputs]: Add r-rhdf5filters.
---
gnu/packages/bioconductor.scm | 16 +++-------------
1 file changed, 3 insertions(+), 13 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 13a1515..ae0df63 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -12140,27 +12140,16 @@ provided.")
(define-public r-hdf5array
(package
(name "r-hdf5array")
- (version "1.18.1")
+ (version "1.20.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "HDF5Array" version))
(sha256
(base32
- "14v2adhwi0yac834g23kvfid740raclhmribzd28k10gsjk9cj7g"))))
+ "1718hplz5qlbwxwb87509bl7lir9kilvn1s7p2haz551pg48zvrc"))))
(properties `((upstream-name . "HDF5Array")))
(build-system r-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'fix-linking
- (lambda _
- (substitute* "src/Makevars"
- ;; This is to avoid having a plain directory on the list of
- ;; libraries to link.
- (("\\(RHDF5LIB_LIBS\\)" match)
- (string-append match "/libhdf5.a")))
- #t)))))
(inputs
`(("zlib" ,zlib)))
(propagated-inputs
@@ -12169,6 +12158,7 @@ provided.")
("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix)
("r-rhdf5" ,r-rhdf5)
+ ("r-rhdf5filters" ,r-rhdf5filters)
("r-rhdf5lib" ,r-rhdf5lib)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://bioconductor.org/packages/HDF5Array";)
