Jan wrote:
we already have
monitor 111 112 113
why not
getProperty("measure","[LIP]3:A.O5","[LIP]3:A.O6","[LIP]3:A.O7")
sure, we'll do something like this.
a monitoring function on your callback.htm
monitor: measurementsChange
works for me, but I miss the corresponding e.g. "monitor 1 2 3" command
which would be much more readable if 1 2 3 where atomInfo[0].info strings
OK
monitor:measureSelection
didn't work?
It doesn't do what you think. First click on "load caffeine.xyz;set
picking DISTANCE"
Now start clicking, while monitoring that property.
I use callbacks in RasMol to query e.g. which amino acids are in 3.2 A
distance to a hetero component
(echo "load pdb inline\nselect within(3.2, [LIP]3) and not [LIP]3\nshow
selected group\nexit\n";cut 1imb.pdb) | rasmol -nodisplay |
evaluateMakeRasMolScriptFromIt.pl | rasmol
without any user, the startup JmolScript could replace the interacting
user, that is the main use for messageCallback
Ah, I see. OK. Well, it's an interesting question how to do:
PDB FILE | (cut off a chunck) | (do something with it) | Jmol
I don't know how Jmol is set up for command-line work like this. It
hardly seems like it would be necessary to run Jmol twice (like you
are running rasmol twice). Maybe this is a nice use for rasmol instead
of Jmol. It does work there --- so why Jmol?
Bob
--
Robert M. Hanson, [EMAIL PROTECTED], 507-646-3107
Professor of Chemistry, St. Olaf College
1520 St. Olaf Ave., Northfield, MN 55057
mailto:[EMAIL PROTECTED]
http://www.stolaf.edu/people/hansonr
"Imagination is more important than knowledge." - Albert Einstein
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