Bob, Here's the script that produced the error in my previous message:
data "model molecule"|12|molecule|C -1.2125 -0.7000 0.0000|C -1.2125 0.7000 0.0000|C 0.0000 1.4000 0.0000|C 1.2124 0.7000 0.0000|C 1.2124 -0.7000 0.0000|C 0.0000 -1.4000 0.0000|H -2.1478 -1.2400 0.0000|H -2.1478 1.2400 0.0000|H 0.0000 2.4800 0.0000|H 2.1477 1.2400 0.0000|H 2.1477 -1.2400 0.0000|H 0.0000 -2.4800 0.0000|end "model molecule";show data; connect (all) (all) delete; connect (atomno=001) (atomno=002 ) AROMATIC create;connect (atomno=002) (atomno=003 ) AROMATIC create;connect (atomno=003) (atomno=004 ) AROMATIC create;connect (atomno=004) (atomno=005 ) AROMATIC create;connect (atomno=005) (atomno=006 ) AROMATIC create;connect (atomno=006) (atomno=001 ) AROMATIC create;connect (atomno=001) (atomno=007 ) SINGLE create;connect (atomno=002) (atomno=008 ) SINGLE create;connect (atomno=003) (atomno=009 ) SINGLE create;connect (atomno=004) (atomno=010 ) SINGLE create;connect (atomno=005) (atomno=011 ) SINGLE create;connect (atomno=006) (atomno=012 ) SINGLE create; set perspectiveDepth off; center all set echo bottom left; font echo 15 sansserif italic; color echo gray; echo Point Group = D6h As I said before, however, I can only produce the error sporadically and only on OS X. In general I can load several molecules successfully before I get this error. It doesn't seem to be a memory issue, however. Let me know if you want me to put up an example page (it's currently just running locally). Dean On 6/8/07 10:39 PM, "Bob Hanson" <[EMAIL PROTECTED]> wrote: > Dean, please send me the script. I'd like to fix this. > > Dean Johnston wrote: > >> I¹m getting an odd (and hard to reproduce) crash with the Jmol applet >> (Firefox or Safari on OS X, version 11.1.48_dev). I try and load an >> inline model and sporadically get the error listed below. It seems to >> always be in the middle of creating the new bonds (my page creates all >> the bonds manually from a connection list) after the molecule loads. >> >> For some reason I never get the same error under Windows (Firefox or IE). >> >> If it¹s any help, my earlier version of the page that uses the 11.1.22 >> applet does not produce the same error. >> >> Dean Johnston >> >> --------------------------- >> FileManager.openStringInline() >> The Resolver thinks Xyz >> ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false >> 1 model in this collection. Use getProperty "modelInfo" or getProperty >> "auxiliaryInfo" to inspect them. >> ModelSet: autobonding; use autobond=false to not generate bonds >> automatically >> data "model molecule" >> |12|molecule|C -1.2125 -0.7000 0.0000|C -1.2125 0.7000 0.0000|C 0.0000 >> 1.4000 0.0000|C 1.2124 0.7000 0.0000|C 1.2124 -0.7000 0.0000|C 0.0000 >> -1.4000 0.0000|H -2.1478 -1.2400 0.0000|H -2.1478 1.2400 0.0000|H >> 0.0000 2.4800 0.0000|H 2.1477 1.2400 0.0000|H 2.1477 -1.2400 0.0000|H >> 0.0000 -2.4800 0.0000| >> 12 bonds deleted >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> Exception in thread "AWT-EventQueue-8" java.lang.NullPointerException >> at org.jmol.shape.Sticks.setModelClickability(Unknown Source) >> at org.jmol.modelset.ModelSet.setModelVisibility(Unknown Source) >> at org.jmol.modelset.ModelManager.setModelVisibility(Unknown Source) >> at org.jmol.viewer.Viewer.setModelVisibility(Unknown Source) >> at org.jmol.viewer.Viewer.renderScreenImage(Unknown Source) >> at org.jmol.applet.Jmol.update(Unknown Source) >> at org.jmol.applet.Jmol.update(Unknown Source) >> at org.jmol.appletwrapper.AppletWrapper.update(Unknown Source) >> at sun.awt.RepaintArea.updateComponent(RepaintArea.java:267) >> at sun.awt.RepaintArea.paint(RepaintArea.java:233) >> at apple.awt.ComponentModel.handleEvent(ComponentModel.java:251) >> at apple.awt.MyCPanel.handleEvent(MyCPanel.java:97) >> at java.awt.Component.dispatchEventImpl(Component.java:4097) >> at java.awt.Container.dispatchEventImpl(Container.java:2068) >> at java.awt.Component.dispatchEvent(Component.java:3869) >> at java.awt.EventQueue.dispatchEvent(EventQueue.java:463) >> at jep.MySimpleEventQueue.dispatchEvent(MySimpleEventQueue.java:59) >> at >> java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchThread.jav >> a:269) >> at >> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java: >> 190) >> at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:184) >> at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:176) >> at java.awt.EventDispatchThread.run(EventDispatchThread.java:110) >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> 1 new bonds; 0 modified >> perspectivedepth = false >> >> ------------------------------------------------------------------------ >> >> ------------------------------------------------------------------------- >> This SF.net email is sponsored by DB2 Express >> Download DB2 Express C - the FREE version of DB2 express and take >> control of your XML. 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