Thanks Angel. I've changed my invocation of Jmol as follows:
<script type="text/javascript">
jmolInitialize('<%= pathToRoot %>nosession/jmol');
jmolApplet([250, 250]);
jmolLoadInline('<%= Utils.toValidJS(calcResults) %>');
</script>
It compiles at runtime as,
jmolInitialize('../../nosession/jmol');
jmolApplet([250, 250]);
jmolLoadInline('\n Marvin 10270415522D\n\n 9 9 0 0 0 0
999 V2000\n -2.2457 0.8188 0.0000 C 0 0 0 0 0 0 0 0
0 0 0 0\n -2.2457 -0.0063 0.0000 C 0 0 0 0 0 0 0 0 0 0 0
0\n -1.5313 -0.4188 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0\n
-0.8168 -0.0063 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0\n -0.8168
0.8188 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0\n -0.1023 1.2313
0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0\n -1.5313 1.2313
0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0\n -1.5313 2.8813 0.0000 C
0 0 0 0 0 0 0 0 0 0 0 0\n -1.5313 2.0563 0.0000 C 0 0
0 0 0 0 0 0 0 0 0 0\n 7 1 1 0 0 0 0\n 7 5 2 0 0 0 0\n 1
2 2 0 0 0 0\n 2 3 1 0 0 0 0\n 3 4 2 0 0 0 0\n 4 5 1 0
0 0 0\n 5 6 1 0 0 0 0\n 8 9 1 0 0 0 0\n 7 9 1 0 0 0 0\nM
APO 1 9 1\nM STY 1 1 SUP\nM SAL 1 2 8 9\nM SBL 1 1 9\nM
SMT 1 Et\nM END\n');
</script>
But although it now appears to load, I don't see a molecule in the viewer.
Furthermore, if I try to open another Jmol applet (with the first page open or
closed), Safari hangs.
________________________________
From: Angel Herráez <angel.herr...@uah.es>
Reply-To: <jmol-users@lists.sourceforge.net>
Date: Wed, 13 Jan 2010 14:26:28 -0500
To: <jmol-users@lists.sourceforge.net>
Conversation: [Jmol-users] Jmol demo page hangs
Subject: Re: [Jmol-users] Jmol demo page hangs
Bob G., thanks for reporting this.
I've run a quick check with a local copy of the offending page, and it's not an
issue of
linefeeds.
It's a bug in Jmol. I can trace it back to between 11.8.7 and 11.8.11.
11.8.15 (the current version at the website) and 11.9.13 fail too.
jmolLoadInline() works fine even with 11.8.15.
It's just jmolAppletInline() that has the problem.
If you change it to
jmolAppletInline("200", "")
then the radio buttons that call jmolLoadInline() work fine.
And I've done all that using the Jmol.js of 11.8.15, so it's not a Jmol.js bug
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