OK, beautiful. This gives my biochemist colleague everything he wanted:
var jsvar = Jmol.evaluate(jmolApplet0, "script('show
file')").replace(/(\r\n|[\r\n])/g, "<br />");Jmol.setInfo(jmolApplet0, jsvar,
true)
Actually, it gives me access to all the "show XXXX" in the "scratchpad", or
whatever you want to call it - info pad?
Is there any way to control that "title." It retains the contents of the
previous call - i.e. number of matches.
Otis
--
Otis Rothenberger
o...@chemagic.com
http://chemagic.com
On Mar 10, 2013, at 1:49 PM, Robert Hanson wrote:
> "show smiles" is a command. jmolEvaluate requires an expression
>
> xxx = JmolEvaluate(jmolApplet0, "script('show smiles')")
>
>
> Bob
>
>
> On Sun, Mar 10, 2013 at 10:20 AM, Otis Rothenberger <osrot...@chemagic.com>
> wrote:
> Thanks Bob, for some reason I keep forgetting about Jmol.evaluate. Even
> though I use it all the time.
>
> I am having a problem, however. The following works:
>
> var jsvar = Jmol.evaluate(jmolApplet0, "2+2");Jmol.setInfo(jmolApplet0,
> jsvar, true)
>
> The following prints ERROR in the "scratchpad" (info ?) screen:
>
> var jsvar = Jmol.evaluate(jmolApplet0, "show
> SMILES");Jmol.setInfo(jmolApplet0, jsvar, true)
>
> I'm using "show SMILES" above, but the ERROR appears to be an issue with any
> show XXXX
>
> Also, it appears there may be a settable title at the top of the scratchpad
> with a [Jmol._Canvas2D (JSmol) "jmolApplet0"] default. Is that correct?
>
> Otis
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
>
> On Mar 9, 2013, at 9:06 PM, Robert Hanson wrote:
>
>> var jsvar = Jmol.evaluate(jmolApplet0, "show PDBHEADER")
>>
>>
>> On Sat, Mar 9, 2013 at 8:06 PM, Robert Hanson <hans...@stolaf.edu> wrote:
>> var
>>
>>
>> On Sat, Mar 9, 2013 at 7:35 PM, Otis Rothenberger <osrot...@chemagic.com>
>> wrote:
>> Angel,
>>
>> No I haven't, but that's a lot easier to work with in the "sketchpad" than
>> the whole pdb file.
>>
>> I'm guessing that this will suffice. If so, I'll use message call back to
>> get it and put it in the "sketchpad."
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>>
>> On Mar 9, 2013, at 1:02 PM, Angel Herráez wrote:
>>
>>> Otis, have you tried
>>> show PDBHEADER
>>> ?
>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
>>> Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
>>> endpoint security space. For insight on selecting the right partner to
>>> tackle endpoint security challenges, access the full report.
>>> http://p.sf.net/sfu/symantec-dev2dev
>>> _______________________________________________
>>> Jmol-users mailing list
>>> Jmol-users@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>>
>> ------------------------------------------------------------------------------
>> Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
>> Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
>> endpoint security space. For insight on selecting the right partner to
>> tackle endpoint security challenges, access the full report.
>> http://p.sf.net/sfu/symantec-dev2dev
>> _______________________________________________
>> Jmol-users mailing list
>> Jmol-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>>
>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> Chair, Chemistry Department
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>>
>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> Chair, Chemistry Department
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>> ------------------------------------------------------------------------------
>> Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
>> Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
>> endpoint security space. For insight on selecting the right partner to
>> tackle endpoint security challenges, access the full report.
>> http://p.sf.net/sfu/symantec-dev2dev_______________________________________________
>> Jmol-users mailing list
>> Jmol-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
> ------------------------------------------------------------------------------
> Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
> Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
> endpoint security space. For insight on selecting the right partner to
> tackle endpoint security challenges, access the full report.
> http://p.sf.net/sfu/symantec-dev2dev
> _______________________________________________
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Chemistry Department
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> ------------------------------------------------------------------------------
> Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
> Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
> endpoint security space. For insight on selecting the right partner to
> tackle endpoint security challenges, access the full report.
> http://p.sf.net/sfu/symantec-dev2dev_______________________________________________
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
------------------------------------------------------------------------------
Symantec Endpoint Protection 12 positioned as A LEADER in The Forrester
Wave(TM): Endpoint Security, Q1 2013 and "remains a good choice" in the
endpoint security space. For insight on selecting the right partner to
tackle endpoint security challenges, access the full report.
http://p.sf.net/sfu/symantec-dev2dev
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
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