Hi Aaron 

Thanks for the details. The problem of folding is of my interest.

I'm hesitant to push you back, but certainly I increasingly think this may be 
not reasonable.

> I'm beginning to feel this project may be too ambitious. Is there some other 
> 3D visualization tool you know of, which does have such capability? Aside 
> from difficulty, do you feel this is a worthy endeavour? I'm starting to 
> worry that even if I did obtain molecularly 'valid' structures, they would be 
> so different from the folded hp model that most meaning would be lost. 

I don't think it is a question of what visualization tool you use, but of the 
(molecular level) rationale behind the problem.



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